Welcome to hdmf-zarr’s documentation!

hdmf_zarr implements a Zarr backend for HDMF as well as convenience classes for integration of Zarr with PyNWB to support writing of NWB files to Zarr.

Status: The Zarr backend is under development and may still change. See the Overview section for a description of available features and known limitations of hdmf-zarr.

Citing hdmf-zarr

  • A. J. Tritt, O. Ruebel, B. Dichter, R. Ly, D. Kang, E. F. Chang, L. M. Frank, K. Bouchard, “HDMF: Hierarchical Data Modeling Framework for Modern Science Data Standards,” 2019 IEEE International Conference on Big Data (Big Data), Los Angeles, CA, USA, 2019, pp. 165-179, doi: 10.1109/BigData47090.2019.9005648.

Indices and tables